• 1446 Citations
  • 18 h-Index
19992020

Research output per year

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Research Output

2020

AGCN: Attention-based graph convolutional networks for drug-drug interaction extraction

Park, C., Park, J. & Park, S., 2020 Nov 30, In : Expert Systems with Applications. 159, 113538.

Research output: Contribution to journalArticle

Combinatorial feature embedding based on CNN and LSTM for biomedical named entity recognition

Cho, M., Ha, J., Park, C. & Park, S., 2020 Mar, In : Journal of Biomedical Informatics. 103, 103381.

Research output: Contribution to journalArticle

IMIPMF: Inferring miRNA-disease interactions using probabilistic matrix factorization

Ha, J., Park, C., Park, C. & Park, S., 2020 Feb, In : Journal of Biomedical Informatics. 102, 103358.

Research output: Contribution to journalArticle

2 Citations (Scopus)

RefDNN: a reference drug based neural network for more accurate prediction of anticancer drug resistance

Choi, J., Park, S. & Ahn, J., 2020 Dec 1, In : Scientific reports. 10, 1, 1861.

Research output: Contribution to journalArticle

Open Access

TLSM: Tiered Log-Structured Merge-Tree Utilizing Non-Volatile Memory

Lee, J., Choi, W. G., Kim, D., Sung, H. & Park, S., 2020 Jan 1, In : IEEE Access. 8, p. 100948-100962 15 p., 9056561.

Research output: Contribution to journalArticle

Open Access
2019

ADC: Advanced document clustering using contextualized representations

Park, J., Park, C., Kim, J., Cho, M. & Park, S., 2019 Dec 15, In : Expert Systems with Applications. 137, p. 157-166 10 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

A scalable and persistent key-value store using non-volatile memory

Kim, D., Choi, W. G., Sung, H. & Park, S., 2019 Jan 1, Proceedings of the ACM Symposium on Applied Computing. Association for Computing Machinery, p. 464-467 4 p. (Proceedings of the ACM Symposium on Applied Computing; vol. Part F147772).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

A write-friendly approach to manage namespace of Hadoop distributed file system by utilizing nonvolatile memory

Choi, W. G. & Park, S., 2019 Oct 1, In : Journal of Supercomputing. 75, 10, p. 6632-6662 31 p.

Research output: Contribution to journalArticle

LESS: Logging Exploiting SnapShot

Sung, H., Jin, M., Shin, M., Roh, H., Choi, W. & Park, S., 2019 Apr 1, 2019 IEEE International Conference on Big Data and Smart Computing, BigComp 2019 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 8679377. (2019 IEEE International Conference on Big Data and Smart Computing, BigComp 2019 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

PMAMCA: Prediction of microRNA-disease association utilizing a matrix completion approach

Ha, J., Park, C. & Park, S., 2019 Mar 20, In : BMC Systems Biology. 13, 1, 33.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)
2018

CASS: A distributed network clustering algorithm based on structure similarity for large-scale network

Kim, J., Shin, M., Kim, J., Park, C., Lee, S., Woo, J., Kim, H., Seo, D., Yu, S. & Park, S., 2018 Oct, In : PloS one. 13, 10, e0203670.

Research output: Contribution to journalArticle

Machine learning-based identification of genetic interactions from heterogeneous gene expression profiles

Park, C., Kim, J. R., Kim, J. & Park, S., 2018 Jul, In : PloS one. 13, 7, e0201056.

Research output: Contribution to journalArticle

1 Citation (Scopus)

MultiPath MultiGet: An Optimized Multiget Method Leveraging SSD Internal Parallelism

Song, K., Kim, J., Lee, D. & Park, S., 2018 Jan 1, Proceedings of the 7th International Conference on Emerging Databases - Technologies, Applications, and Theory. Choi, W., Lee, W., Song, M. & Jung, S. (eds.). Springer Verlag, p. 138-150 13 p. (Lecture Notes in Electrical Engineering; vol. 461).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

MV-FTL: An FTL that provides page-level multi-version management

Lee, D., Shin, M., Choi, W., Roh, H. & Park, S., 2018 Jan, In : IEEE Transactions on Knowledge and Data Engineering. 30, 1, p. 87-100 14 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Selective I/O bypass and load balancing method for write-through SSD caching in big data analytics

Kim, J., Roh, H. & Park, S., 2018 Apr 1, In : IEEE Transactions on Computers. 67, 4, p. 589-595 7 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)
2017

Advanced block nested loop join for extending SSD lifetime

Roh, H., Shin, M., Jung, W. & Park, S., 2017 Apr 1, In : IEEE Transactions on Knowledge and Data Engineering. 29, 4, p. 743-756 14 p., 7814205.

Research output: Contribution to journalArticle

2 Citations (Scopus)

CATS: A big network clustering algorithm based on triangle structures

Shin, M., Kim, J., Kim, J., Seo, D., Park, C., Yu, S. J. & Park, S., 2017 Apr 3, 32nd Annual ACM Symposium on Applied Computing, SAC 2017. Association for Computing Machinery, p. 1590-1592 3 p. (Proceedings of the ACM Symposium on Applied Computing; vol. Part F128005).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

CSnet: Constructing symptom network based on disease-symptom relationships

Hwang, S., Kim, J., Kim, J. & Park, S., 2017 Nov 27, 2017 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2017. Institute of Electrical and Electronics Engineers Inc., p. 960-965 6 p. (2017 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2017; vol. 2017-January).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

DSS: A biclustering method to identify diverse and state specific gene modules in gene expression data

Kim, J., Yeu, Y., Kim, J., Yoon, Y. & Park, S., 2017 Feb 6, 2016 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2016 - Conference Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 430-434 5 p. 7844279. (2016 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2016 - Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

GRiD: Gathering rich data from PubMed using one-class SVM

Cha, J., Kim, J. & Park, S., 2017 Feb 6, 2016 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2016 - Conference Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 4325-4331 7 p. 7844911. (2016 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2016 - Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

IMA: Identifying disease-related genes using MeSH terms and association rules

Kim, J., Bang, C., Hwang, H., Kim, D., Park, C. & Park, S., 2017 Dec, In : Journal of Biomedical Informatics. 76, p. 110-123 14 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Improved prediction of breast cancer outcome by identifying heterogeneous biomarkers

Choi, J., Park, S., Yoon, Y. & Ahn, J., 2017 Nov 15, In : Bioinformatics. 33, 22, p. 3619-3626 8 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)

ISN: Inferring disease-related genes using seed gene and network analysis

Kim, J. & Park, S., 2017 Nov 27, 2017 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2017. Institute of Electrical and Electronics Engineers Inc., p. 2012-2017 6 p. (2017 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2017; vol. 2017-January).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

LIF: A method to infer disease-gene relationships using literature data and impact factor

Kim, J., Kim, C., Lee, J., Park, S. & Kang, H., 2017 Apr 3, 32nd Annual ACM Symposium on Applied Computing, SAC 2017. Association for Computing Machinery, p. 3-10 8 p. (Proceedings of the ACM Symposium on Applied Computing; vol. Part F128005).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Machine learning based performance modeling of flash SSDs

Kim, J., Park, J. & Park, S., 2017 Nov 6, CIKM 2017 - Proceedings of the 2017 ACM Conference on Information and Knowledge Management. Association for Computing Machinery, p. 2135-2138 4 p. (International Conference on Information and Knowledge Management, Proceedings; vol. Part F131841).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neural network for saturation prediction of solid state drives

Kim, J., Park, J. & Park, S., 2017 Nov 27, 2017 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2017. Institute of Electrical and Electronics Engineers Inc., p. 2069-2074 6 p. (2017 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2017; vol. 2017-January).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Optimization of a multiversion index on SSDs to improve system performance

Choi, W. G., Shin, M., Lee, D., Park, H. & Park, S., 2017 Feb 6, 2016 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2016 - Conference Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 1620-1625 6 p. 7844471. (2016 IEEE International Conference on Systems, Man, and Cybernetics, SMC 2016 - Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Recommending alternative drugs by using generic drug names to minimise side effects

Hwang, S., Kim, J., Kim, J. & Park, S., 2017 Jan 1, In : International Journal of Data Mining and Bioinformatics. 18, 4, p. 301-314 14 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

SSL: Inferring disease-related genes using sentence structure and literature data

Kim, J., Choi, W. G., Kim, J. & Park, S., 2017 Mar 17, 2017 IEEE International Conference on Big Data and Smart Computing, BigComp 2017. Institute of Electrical and Electronics Engineers Inc., p. 100-107 8 p. 7881723. (2017 IEEE International Conference on Big Data and Smart Computing, BigComp 2017).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)
2016

A method for obtaining rich data from PubMed using SVM

Cha, J., Kim, J., Yeu, Y. & Park, S., 2016 Apr 4, 2016 Symposium on Applied Computing, SAC 2016. Association for Computing Machinery, p. 37-39 3 p. (Proceedings of the ACM Symposium on Applied Computing; vol. 04-08-April-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Discovering disease-associated drugs using web crawl data

Kim, H. & Park, S., 2016 Apr 4, 2016 Symposium on Applied Computing, SAC 2016. Association for Computing Machinery, p. 9-14 6 p. (Proceedings of the ACM Symposium on Applied Computing; vol. 04-08-April-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Efficient processing of continuous queries utilizing F-relationship in stock databases

Park, S., Ha, Y. M., Park, C. & Kim, S. W., 2016 Jan, In : Computer Science and Information Systems. 13, 1, p. 131-149 19 p.

Research output: Contribution to journalArticle

External Mergesort for Flash-Based Solid State Drives

Lee, J., Roh, H. & Park, S., 2016 May 1, In : IEEE Transactions on Computers. 65, 5, p. 1518-1527 10 p., 7145402.

Research output: Contribution to journalArticle

5 Citations (Scopus)

IDO: Inferring describable disease-gene relationships using opinion sentences

Kim, J., Yoon, Y. & Park, S., 2016 Apr 4, 2016 Symposium on Applied Computing, SAC 2016. Association for Computing Machinery, p. 15-22 8 p. (Proceedings of the ACM Symposium on Applied Computing; vol. 04-08-April-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Optimizing hash partitioning for solid state drives

Shin, M., Roh, H., Jung, W. & Park, S., 2016 Apr 4, 2016 Symposium on Applied Computing, SAC 2016. Association for Computing Machinery, p. 1000-1007 8 p. (Proceedings of the ACM Symposium on Applied Computing; vol. 04-08-April-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Recommend alternative drugs to minimize side-effect using generic name of drug

Hwang, S., Kim, J. & Park, S., 2016 Oct 17, Proceedings of the 6th International Conference on Emerging Databases: Technologies, Applications, and Theory, EDB 2016. Leung, C. K. (ed.). Association for Computing Machinery, p. 149-155 7 p. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Replica parallelism to utilize the granularity of data

Choi, W. G. & Park, S., 2016 Oct 17, Proceedings of the 6th International Conference on Emerging Databases: Technologies, Applications, and Theory, EDB 2016. Leung, C. K. (ed.). Association for Computing Machinery, p. 35-42 8 p. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Take me to SSD: A hybrid block-selection method on HDFS based on storage type

Kim, M., Shin, M. & Park, S., 2016 Apr 4, 2016 Symposium on Applied Computing, SAC 2016. Association for Computing Machinery, p. 965-971 7 p. (Proceedings of the ACM Symposium on Applied Computing; vol. 04-08-April-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)
2015

A literature-driven method to calculate similarities among diseases

Kim, H., Yoon, Y., Ahn, J. & Park, S., 2015 Nov, In : Computer Methods and Programs in Biomedicine. 122, 2, p. 108-122 15 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)
5 Citations (Scopus)

BulkAligner: A novel sequence alignment algorithm based on graph theory and Trinity

Lee, J., Yeu, Y., Roh, H., Yoon, Y. & Park, S., 2015 May 10, In : Information sciences. 303, p. 120-133 14 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Inference of disease-specific gene interaction network using a Bayesian network learned by genetic algorithm

Jeong, D., Yeu, Y., Ahn, J., Yoon, Y. & Park, S., 2015 Apr 13, 2015 Symposium on Applied Computing, SAC 2015. Shin, D. (ed.). Association for Computing Machinery, p. 47-53 7 p. (Proceedings of the ACM Symposium on Applied Computing; vol. 13-17-April-2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Inverted index maintenance strategy for flashSSDs: Revitalization of in-place index update strategy

Jung, W., Roh, H., Shin, M. & Park, S., 2015 Apr, In : Information Systems. 49, p. 25-39 15 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

LGscore: A method to identify disease-related genes using biological literature and Google data

Kim, J., Kim, H., Yoon, Y. & Park, S., 2015 Apr 1, In : Journal of Biomedical Informatics. 54, p. 270-282 13 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)

Protein localization vector propagation: a method for improving the accuracy of drug repositioning

Yeu, Y., Yoon, Y. & Park, S., 2015 Jul 1, In : Molecular BioSystems. 11, 7, p. 2096-2102 7 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)
2014

AS B-tree: A Study of an Efficient B+-tree for SSDs

Roh, H., Kim, S., Lee, D. & Park, S., 2014 Jan 1, In : Journal of Information Science and Engineering. 30, 1, p. 85-106 22 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Discovering phenotype specific gene module using a novel biclustering algorithm in colorectal cancer

Kim, J., Yoon, Y., Park, S., Ahn, J. & Yeu, Y., 2014 Dec 29, Proceedings - 2014 IEEE International Conference on Bioinformatics and Biomedicine, IEEE BIBM 2014. Zheng, H., Hu, X. T., Wang, Y., Hao, J-K., Gilbert, D., Berrar, D., Cho, K-H. & Dubitzky, W. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 201-204 4 p. 6999154. (Proceedings - 2014 IEEE International Conference on Bioinformatics and Biomedicine, IEEE BIBM 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Integrative gene network construction to analyze cancer recurrence using semi-supervised learning

Park, C., Ahn, J., Kim, H. & Park, S., 2014 Jan 31, In : PloS one. 9, 1, e86309.

Research output: Contribution to journalArticle

21 Citations (Scopus)