• 1446 Citations
  • 18 h-Index
19992020

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Article
2020

AGCN: Attention-based graph convolutional networks for drug-drug interaction extraction

Park, C., Park, J. & Park, S., 2020 Nov 30, In : Expert Systems with Applications. 159, 113538.

Research output: Contribution to journalArticle

Combinatorial feature embedding based on CNN and LSTM for biomedical named entity recognition

Cho, M., Ha, J., Park, C. & Park, S., 2020 Mar, In : Journal of Biomedical Informatics. 103, 103381.

Research output: Contribution to journalArticle

IMIPMF: Inferring miRNA-disease interactions using probabilistic matrix factorization

Ha, J., Park, C., Park, C. & Park, S., 2020 Feb, In : Journal of Biomedical Informatics. 102, 103358.

Research output: Contribution to journalArticle

2 Citations (Scopus)

RefDNN: a reference drug based neural network for more accurate prediction of anticancer drug resistance

Choi, J., Park, S. & Ahn, J., 2020 Dec 1, In : Scientific reports. 10, 1, 1861.

Research output: Contribution to journalArticle

Open Access

TLSM: Tiered Log-Structured Merge-Tree Utilizing Non-Volatile Memory

Lee, J., Choi, W. G., Kim, D., Sung, H. & Park, S., 2020 Jan 1, In : IEEE Access. 8, p. 100948-100962 15 p., 9056561.

Research output: Contribution to journalArticle

Open Access
2019

ADC: Advanced document clustering using contextualized representations

Park, J., Park, C., Kim, J., Cho, M. & Park, S., 2019 Dec 15, In : Expert Systems with Applications. 137, p. 157-166 10 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

A write-friendly approach to manage namespace of Hadoop distributed file system by utilizing nonvolatile memory

Choi, W. G. & Park, S., 2019 Oct 1, In : Journal of Supercomputing. 75, 10, p. 6632-6662 31 p.

Research output: Contribution to journalArticle

PMAMCA: Prediction of microRNA-disease association utilizing a matrix completion approach

Ha, J., Park, C. & Park, S., 2019 Mar 20, In : BMC Systems Biology. 13, 1, 33.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)
2018

CASS: A distributed network clustering algorithm based on structure similarity for large-scale network

Kim, J., Shin, M., Kim, J., Park, C., Lee, S., Woo, J., Kim, H., Seo, D., Yu, S. & Park, S., 2018 Oct, In : PloS one. 13, 10, e0203670.

Research output: Contribution to journalArticle

Machine learning-based identification of genetic interactions from heterogeneous gene expression profiles

Park, C., Kim, J. R., Kim, J. & Park, S., 2018 Jul, In : PloS one. 13, 7, e0201056.

Research output: Contribution to journalArticle

1 Citation (Scopus)

MV-FTL: An FTL that provides page-level multi-version management

Lee, D., Shin, M., Choi, W., Roh, H. & Park, S., 2018 Jan, In : IEEE Transactions on Knowledge and Data Engineering. 30, 1, p. 87-100 14 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Selective I/O bypass and load balancing method for write-through SSD caching in big data analytics

Kim, J., Roh, H. & Park, S., 2018 Apr 1, In : IEEE Transactions on Computers. 67, 4, p. 589-595 7 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)
2017

Advanced block nested loop join for extending SSD lifetime

Roh, H., Shin, M., Jung, W. & Park, S., 2017 Apr 1, In : IEEE Transactions on Knowledge and Data Engineering. 29, 4, p. 743-756 14 p., 7814205.

Research output: Contribution to journalArticle

2 Citations (Scopus)

IMA: Identifying disease-related genes using MeSH terms and association rules

Kim, J., Bang, C., Hwang, H., Kim, D., Park, C. & Park, S., 2017 Dec, In : Journal of Biomedical Informatics. 76, p. 110-123 14 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Improved prediction of breast cancer outcome by identifying heterogeneous biomarkers

Choi, J., Park, S., Yoon, Y. & Ahn, J., 2017 Nov 15, In : Bioinformatics. 33, 22, p. 3619-3626 8 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)

Recommending alternative drugs by using generic drug names to minimise side effects

Hwang, S., Kim, J., Kim, J. & Park, S., 2017 Jan 1, In : International Journal of Data Mining and Bioinformatics. 18, 4, p. 301-314 14 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2016

Efficient processing of continuous queries utilizing F-relationship in stock databases

Park, S., Ha, Y. M., Park, C. & Kim, S. W., 2016 Jan, In : Computer Science and Information Systems. 13, 1, p. 131-149 19 p.

Research output: Contribution to journalArticle

External Mergesort for Flash-Based Solid State Drives

Lee, J., Roh, H. & Park, S., 2016 May 1, In : IEEE Transactions on Computers. 65, 5, p. 1518-1527 10 p., 7145402.

Research output: Contribution to journalArticle

5 Citations (Scopus)
2015

A literature-driven method to calculate similarities among diseases

Kim, H., Yoon, Y., Ahn, J. & Park, S., 2015 Nov, In : Computer Methods and Programs in Biomedicine. 122, 2, p. 108-122 15 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)
5 Citations (Scopus)

BulkAligner: A novel sequence alignment algorithm based on graph theory and Trinity

Lee, J., Yeu, Y., Roh, H., Yoon, Y. & Park, S., 2015 May 10, In : Information sciences. 303, p. 120-133 14 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Inverted index maintenance strategy for flashSSDs: Revitalization of in-place index update strategy

Jung, W., Roh, H., Shin, M. & Park, S., 2015 Apr, In : Information Systems. 49, p. 25-39 15 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

LGscore: A method to identify disease-related genes using biological literature and Google data

Kim, J., Kim, H., Yoon, Y. & Park, S., 2015 Apr 1, In : Journal of Biomedical Informatics. 54, p. 270-282 13 p.

Research output: Contribution to journalArticle

15 Citations (Scopus)

Protein localization vector propagation: a method for improving the accuracy of drug repositioning

Yeu, Y., Yoon, Y. & Park, S., 2015 Jul 1, In : Molecular BioSystems. 11, 7, p. 2096-2102 7 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)
2014

AS B-tree: A Study of an Efficient B+-tree for SSDs

Roh, H., Kim, S., Lee, D. & Park, S., 2014 Jan 1, In : Journal of Information Science and Engineering. 30, 1, p. 85-106 22 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Integrative gene network construction to analyze cancer recurrence using semi-supervised learning

Park, C., Ahn, J., Kim, H. & Park, S., 2014 Jan 31, In : PloS one. 9, 1, e86309.

Research output: Contribution to journalArticle

21 Citations (Scopus)

Shape-based retrieval of CNV regions in read coverage data

Hong, S., Yoon, J., Hong, D., Lee, U., Kim, B. & Park, S., 2014, In : International Journal of Data Mining and Bioinformatics. 9, 3, p. 254-276 23 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2013

CORE: Common region extension based multiple protein structure alignment for producing multiple solution

Kim, W. C., Park, S. & Won, J. I., 2013 Jul 1, In : Journal of Computer Science and Technology. 28, 4, p. 647-656 10 p.

Research output: Contribution to journalArticle

ICP: A novel approach to predict prognosis of prostate cancer with inner-class clustering of gene expression data

Kim, H., Ahn, J., Park, C., Yoon, Y. & Park, S., 2013 Oct 1, In : Computers in Biology and Medicine. 43, 10, p. 1363-1373 11 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Impact of TGF-b on breast cancer from a quantitative proteomic analysis

Ahn, J., Yoon, Y., Yeu, Y., Lee, H. & Park, S., 2013 Dec 1, In : Computers in Biology and Medicine. 43, 12, p. 2096-2102 7 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Improved method for protein complex detection using bottleneck proteins

Ahn, J., Lee, D. H., Yoon, Y., Yeu, Y. & Park, S., 2013 Apr 12, In : BMC Medical Informatics and Decision Making. 13, SUPPL1, S5.

Research output: Contribution to journalArticle

4 Citations (Scopus)

One-dimensional spatial join processing using a DOT-based index structure

Won, J. L., Back, H., Yoon, J. H., Park, S. H. & Kim, S. W., 2013 Mar 1, In : Computer Systems Science and Engineering. 28, 2, p. 101-115 15 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2012

CNV detection method optimized for high-resolution arrayCGH by normality test

Ahn, J., Yoon, Y., Park, C. & Park, S., 2012 Apr 1, In : Computers in Biology and Medicine. 42, 4, p. 468-473 6 p.

Research output: Contribution to journalArticle

Identification of functional CNV region networks using a CNV-gene mapping algorithm in a genome-wide scale

Park, C., Ahn, J., Yoon, Y. & Park, S., 2012 Aug 1, In : Bioinformatics. 28, 15, p. 2045-2051 7 p., bts318.

Research output: Contribution to journalArticle

2 Citations (Scopus)
2011

A multi-sample based method for identifying common CNVs in normal human genomic structure using high-resolution aCGH data

Park, C., Ahn, J., Yoon, Y. & Park, S., 2011 Nov 4, In : PloS one. 6, 10, e26975.

Research output: Contribution to journalArticle

4 Citations (Scopus)

B+-tree index optimization by exploiting internal parallelism of flash-based solid state drives

Roh, H., Park, S., Kim, S., Shin, M. & Lee, S. W., 2011 Dec, In : Proceedings of the VLDB Endowment. 5, 4, p. 286-297 12 p.

Research output: Contribution to journalArticle

53 Citations (Scopus)

Extraction of informative genes from multiple microarray data integrated by rank-based approach

Hong, D., Yoon, J., Lee, J., Park, S. & Kim, J., 2011 Apr, In : IEICE Transactions on Information and Systems. E94-D, 4, p. 841-854 14 p.

Research output: Contribution to journalArticle

HapEdit: An accuracy assessment viewer for haplotype assembly using massively parallel DNA-sequencing technologies

Kim, J. H., Kim, W. C., Li, L. M. & Park, S., 2011 Jul 1, In : Nucleic acids research. 39, SUPPL. 2, p. W557-W561

Research output: Contribution to journalArticle

Integrative gene network construction for predicting a set of complementary prostate cancer genes

Ahn, J., Yoon, Y., Park, C., Shin, E. & Park, S., 2011 Jul 1, In : Bioinformatics. 27, 13, p. 1846-1853 8 p., btr283.

Research output: Contribution to journalArticle

30 Citations (Scopus)

Noise-robust algorithm for identifying functionally associated biclusters from gene expression data

Ahn, J., Yoon, Y. & Park, S., 2011 Feb 1, In : Information sciences. 181, 3, p. 435-449 15 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

TC-VGC: A Tumor Classification System using Variations in Genes' Correlation

Shin, E., Yoon, Y., Ahn, J. & Park, S., 2011 Dec 1, In : Computer Methods and Programs in Biomedicine. 104, 3, p. e87-e101

Research output: Contribution to journalArticle

6 Citations (Scopus)
2010

Efficient processing of spatial joins with DOT-based indexing

Back, H., Won, J. I., Yoon, J. H., Park, S. H. & Kim, S. W., 2010 Apr 15, In : Information Sciences. 180, 8, p. 1292-1312 21 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
12 Citations (Scopus)
2009

A B-Tree index extension to enhance response time and the life cycle of flash memory

Roh, H., Kim, W. C., Kim, S. & Park, S., 2009 Aug 21, In : Information sciences. 179, 18, p. 3136-3161 26 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

A stock recommendation system exploiting rule discovery in stock databases

Ha, Y. M., Park, S., Kim, S. W., Won, J. I. & Yoon, J. H., 2009 Jul 1, In : Information and Software Technology. 51, 7, p. 1140-1149 10 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

HAPLOWSER: A whole-genome haplotype browser for personal genome and metagenome

Kim, J. H., Kim, W. C., Waterman, M. S., Park, S. & Li, L. M., 2009 Sep, In : Bioinformatics. 25, 18, p. 2430-2431 2 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)
2008

An efficient frequent melody indexing method to improve the performance of query-by-humming systems

You, J., Park, S. & Kim, I., 2008 Dec 1, In : Journal of Information Science. 34, 6, p. 777-798 22 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)
29 Citations (Scopus)

Direct integration of microarrays for selecting informative genes and phenotype classification

Yoon, Y., Lee, J., Park, S., Bien, S., Chung, H. C. & Rha, S. Y., 2008 Jan 2, In : Information sciences. 178, 1, p. 88-105 18 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)