A fluorescent natural product for ultra sensitive detection of proteins in one-dimensional and two-dimensional gel electrophoresis

James A. Mackintosh, Hung Yoon Choi, Soo Han Bae, Duncan A. Veal, Philip J. Bell, Belinda C. Ferrari, Derek D. Van Dyk, Nicole M. Verrills, Young-Ki Paik, Peter Karuso

Research output: Contribution to journalArticle

112 Citations (Scopus)

Abstract

Lightning Fast is a sensitive fluorescence-based stain for detecting proteins in one-dimensional and two-dimensional polyacrylamide electrophoresis gels. It contains the fluorophore epicocconone from the fungus Epicoccum nigrum that interacts noncovalently with sodium dodecyl sulfate and protein. Stained proteins can be excited optimally by near-ultraviolet light of about 395 nm or with visible light of about 520 nm. The stain can be excited using a range of sources used in image analysis systems including UVA (ca. 365 nm) and UVB (ca. 302 nm) transilluminators; Xenon-arc lamps; 488 nm and 457 nm Argon-ion lasers; 473 nm and 532 nm neodymium: yttrium aluminum garnet (Nd:YAG) solid-state lasers; 543 nm helium-neon lasers, and emerging violet, blue and green diode lasers. Maximum fluorescence emission of the dye is at approximately 610 nm. The limit of detection in one-dimensional gels stained with Lightning Fast protein gel stain is less than 100 pg of protein, rivaling the current limits of matrix-assisted laser desorption/ionization-mass spectrometry (MALDI-MS). Lightning Fast was found to be considerably more sensitive than SYPRO Ruby, SYPRO Orange, silver and Coomassie Brilliant Blue G-250 in matched experiments. Staining takes as little as 3.5 h and stained proteins displayed quantitative linearity over more than four orders of magnitude, thereby allowing visualization of entire proteomes. Lightning Fast protein gel staining is compatible with subsequent peptide mass fingerprinting using MALDI-MS and Edman-based sequencing chemistry.

Original languageEnglish
Pages (from-to)2273-2288
Number of pages16
JournalProteomics
Volume3
Issue number12
DOIs
Publication statusPublished - 2003 Dec 1

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Electrophoresis, Gel, Two-Dimensional
Biological Products
Electrophoresis
Lightning
Gels
Coloring Agents
Proteins
Gas Lasers
Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
Solid-State Lasers
Ionization
Mass spectrometry
Lasers
Desorption
Fluorescence
Helium neon lasers
Arc lamps
Neon
Staining and Labeling
Neodymium

All Science Journal Classification (ASJC) codes

  • Biochemistry
  • Molecular Biology

Cite this

Mackintosh, J. A., Choi, H. Y., Bae, S. H., Veal, D. A., Bell, P. J., Ferrari, B. C., ... Karuso, P. (2003). A fluorescent natural product for ultra sensitive detection of proteins in one-dimensional and two-dimensional gel electrophoresis. Proteomics, 3(12), 2273-2288. https://doi.org/10.1002/pmic.200300578
Mackintosh, James A. ; Choi, Hung Yoon ; Bae, Soo Han ; Veal, Duncan A. ; Bell, Philip J. ; Ferrari, Belinda C. ; Van Dyk, Derek D. ; Verrills, Nicole M. ; Paik, Young-Ki ; Karuso, Peter. / A fluorescent natural product for ultra sensitive detection of proteins in one-dimensional and two-dimensional gel electrophoresis. In: Proteomics. 2003 ; Vol. 3, No. 12. pp. 2273-2288.
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abstract = "Lightning Fast is a sensitive fluorescence-based stain for detecting proteins in one-dimensional and two-dimensional polyacrylamide electrophoresis gels. It contains the fluorophore epicocconone from the fungus Epicoccum nigrum that interacts noncovalently with sodium dodecyl sulfate and protein. Stained proteins can be excited optimally by near-ultraviolet light of about 395 nm or with visible light of about 520 nm. The stain can be excited using a range of sources used in image analysis systems including UVA (ca. 365 nm) and UVB (ca. 302 nm) transilluminators; Xenon-arc lamps; 488 nm and 457 nm Argon-ion lasers; 473 nm and 532 nm neodymium: yttrium aluminum garnet (Nd:YAG) solid-state lasers; 543 nm helium-neon lasers, and emerging violet, blue and green diode lasers. Maximum fluorescence emission of the dye is at approximately 610 nm. The limit of detection in one-dimensional gels stained with Lightning Fast protein gel stain is less than 100 pg of protein, rivaling the current limits of matrix-assisted laser desorption/ionization-mass spectrometry (MALDI-MS). Lightning Fast was found to be considerably more sensitive than SYPRO Ruby, SYPRO Orange, silver and Coomassie Brilliant Blue G-250 in matched experiments. Staining takes as little as 3.5 h and stained proteins displayed quantitative linearity over more than four orders of magnitude, thereby allowing visualization of entire proteomes. Lightning Fast protein gel staining is compatible with subsequent peptide mass fingerprinting using MALDI-MS and Edman-based sequencing chemistry.",
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Mackintosh, JA, Choi, HY, Bae, SH, Veal, DA, Bell, PJ, Ferrari, BC, Van Dyk, DD, Verrills, NM, Paik, Y-K & Karuso, P 2003, 'A fluorescent natural product for ultra sensitive detection of proteins in one-dimensional and two-dimensional gel electrophoresis', Proteomics, vol. 3, no. 12, pp. 2273-2288. https://doi.org/10.1002/pmic.200300578

A fluorescent natural product for ultra sensitive detection of proteins in one-dimensional and two-dimensional gel electrophoresis. / Mackintosh, James A.; Choi, Hung Yoon; Bae, Soo Han; Veal, Duncan A.; Bell, Philip J.; Ferrari, Belinda C.; Van Dyk, Derek D.; Verrills, Nicole M.; Paik, Young-Ki; Karuso, Peter.

In: Proteomics, Vol. 3, No. 12, 01.12.2003, p. 2273-2288.

Research output: Contribution to journalArticle

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T1 - A fluorescent natural product for ultra sensitive detection of proteins in one-dimensional and two-dimensional gel electrophoresis

AU - Mackintosh, James A.

AU - Choi, Hung Yoon

AU - Bae, Soo Han

AU - Veal, Duncan A.

AU - Bell, Philip J.

AU - Ferrari, Belinda C.

AU - Van Dyk, Derek D.

AU - Verrills, Nicole M.

AU - Paik, Young-Ki

AU - Karuso, Peter

PY - 2003/12/1

Y1 - 2003/12/1

N2 - Lightning Fast is a sensitive fluorescence-based stain for detecting proteins in one-dimensional and two-dimensional polyacrylamide electrophoresis gels. It contains the fluorophore epicocconone from the fungus Epicoccum nigrum that interacts noncovalently with sodium dodecyl sulfate and protein. Stained proteins can be excited optimally by near-ultraviolet light of about 395 nm or with visible light of about 520 nm. The stain can be excited using a range of sources used in image analysis systems including UVA (ca. 365 nm) and UVB (ca. 302 nm) transilluminators; Xenon-arc lamps; 488 nm and 457 nm Argon-ion lasers; 473 nm and 532 nm neodymium: yttrium aluminum garnet (Nd:YAG) solid-state lasers; 543 nm helium-neon lasers, and emerging violet, blue and green diode lasers. Maximum fluorescence emission of the dye is at approximately 610 nm. The limit of detection in one-dimensional gels stained with Lightning Fast protein gel stain is less than 100 pg of protein, rivaling the current limits of matrix-assisted laser desorption/ionization-mass spectrometry (MALDI-MS). Lightning Fast was found to be considerably more sensitive than SYPRO Ruby, SYPRO Orange, silver and Coomassie Brilliant Blue G-250 in matched experiments. Staining takes as little as 3.5 h and stained proteins displayed quantitative linearity over more than four orders of magnitude, thereby allowing visualization of entire proteomes. Lightning Fast protein gel staining is compatible with subsequent peptide mass fingerprinting using MALDI-MS and Edman-based sequencing chemistry.

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