A PHF8 homolog in C. elegans promotes DNA repair via homologous recombination

Changrim Lee, Seokbong Hong, Min Hye Lee, Hyeon-Sook Koo

Research output: Contribution to journalArticle

7 Citations (Scopus)

Abstract

PHF8 is a JmjC domain-containing histone demethylase, defects in which are associated with X-linked mental retardation. In this study, we examined the roles of two PHF8 homologs, JMJD-1.1 and JMJD-1.2, in the model organism C . elegans in response to DNA damage. A deletion mutation in either of the genes led to hypersensitivity to interstrand DNA crosslinks (ICLs), while only mutation of jmjd-1.1 resulted in hypersensitivity to doublestrand DNA breaks (DSBs). In response to ICLs, JMJD-1.1 did not affect the focus formation of FCD-2, a homolog of FANCD2, a key protein in the Fanconi anemia pathway. However, the dynamic behavior of RPA-1 and RAD-51 was affected by the mutation: the accumulations of both proteins at ICLs appeared normal, but their subsequent disappearance was retarded, suggesting that later steps of homologous recombination were defective. Similar changes in the dynamic behavior of RPA-1 and RAD-51 were seen in response to DSBs, supporting a role of JMJD-1.1 in homologous recombination. Such a role was also supported by our finding that the hypersensitivity of jmjd-1.1 worms to ICLs was rescued by knockdown of lig-4, a homolog of Ligase 4 active in nonhomologous end-joining. The hypersensitivity of jmjd-1.1 worms to ICLs was increased by rad-54 knockdown, suggesting that JMJD-1.1 acts in parallel with RAD-54 in modulating chromatin structure. Indeed, the level of histone H3 Lys9 tri-methylation, a marker of heterochromatin, was higher in jmjd-1 .1 cells than in wild-type cells. We conclude that the histone demethylase JMJD-1.1 influences homologous recombination either by relaxing heterochromatin structure or by indirectly regulating the expression of multiple genes affecting DNA repair.

Original languageEnglish
Article numbere0123865
JournalPloS one
Volume10
Issue number4
DOIs
Publication statusPublished - 2015 Apr 8

Fingerprint

Recombinational DNA Repair
homologous recombination
DNA repair
Repair
Homologous Recombination
Hypersensitivity
DNA
hypersensitivity
DNA Breaks
Heterochromatin
histones
Jumonji Domain-Containing Histone Demethylases
Fanconi Anemia Complementation Group Proteins
Histone Demethylases
heterochromatin
X-Linked Mental Retardation
Sequence Deletion
Ligases
DNA Repair
mutation

All Science Journal Classification (ASJC) codes

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)

Cite this

Lee, Changrim ; Hong, Seokbong ; Lee, Min Hye ; Koo, Hyeon-Sook. / A PHF8 homolog in C. elegans promotes DNA repair via homologous recombination. In: PloS one. 2015 ; Vol. 10, No. 4.
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A PHF8 homolog in C. elegans promotes DNA repair via homologous recombination. / Lee, Changrim; Hong, Seokbong; Lee, Min Hye; Koo, Hyeon-Sook.

In: PloS one, Vol. 10, No. 4, e0123865, 08.04.2015.

Research output: Contribution to journalArticle

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