An insight into the hybridization mechanism of hairpin DNA physically immobilized on chemically modified graphenes

Adeline Huiling Loo, Alessandra Bonanni, Martin Pumera

Research output: Contribution to journalArticle

10 Citations (Scopus)

Abstract

There is an emerging interest in developing electrochemical DNA biosensors which rely on label-free protocols for the detection of DNA hybridization and polymorphism. Lately, many of them have been using DNA probes which were physically adsorbed onto different graphene platforms. In these works, the biorecognition event is monitored by electrochemical impedance spectroscopy and the detection mechanism proposed needs verification by orthogonal methods. Here, we aim to provide an insight into the mechanism behind the impedimetric signal change upon the hybridization event on graphene platforms. For this aim, we used an orthogonal electrochemical method, differential pulse voltammetry, to examine the oxidation of guanine on target DNA molecules hybridized with an inosine-substituted hairpin DNA probe. We show that the successful biorecognition event leads to desorption of dsDNA from graphenic surfaces on a wide range of graphenic surfaces, such as graphene oxide, electrochemically reduced graphene oxide and thermally reduced graphene oxide. These results confirm the previous hypothesis based on electrochemical impedance spectroscopy data. In addition, these findings also have a profound impact on the understanding of both the interactions between DNA and graphene platforms and the DNA recognition event on graphene platforms for the construction of biosensors.

Original languageEnglish
Pages (from-to)467-471
Number of pages5
JournalAnalyst
Volume138
Issue number2
DOIs
Publication statusPublished - 2013 Jan 21

Fingerprint

Immobilized Nucleic Acids
Graphite
Graphene
DNA
Oxides
Dielectric Spectroscopy
DNA Probes
oxide
Biosensing Techniques
Electrochemical impedance spectroscopy
Biosensors
spectroscopy
probe
electrochemical method
Inosine
Guanine
Voltammetry
Polymorphism
Labels
Desorption

All Science Journal Classification (ASJC) codes

  • Analytical Chemistry
  • Biochemistry
  • Environmental Chemistry
  • Spectroscopy
  • Electrochemistry

Cite this

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An insight into the hybridization mechanism of hairpin DNA physically immobilized on chemically modified graphenes. / Loo, Adeline Huiling; Bonanni, Alessandra; Pumera, Martin.

In: Analyst, Vol. 138, No. 2, 21.01.2013, p. 467-471.

Research output: Contribution to journalArticle

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