Carbohydrate microarrays for enzymatic reactions and quantification of binding affinities for glycan-protein interactions

Myung Ryul Lee, Sungjin Park, Injae Shin

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Citations (Scopus)

Abstract

Glycans are involved in a variety of physiological and pathological processes through interactions with proteins. Thus, the molecular basis of glycan-protein interactions provides valuable information on understanding biological phenomena and exploiting more effective carbohydrate-based therapeutic agents and diagnostic tools. Carbohydrate microarray technology has become a powerful tool for evaluating glycan-mediated biological events in a high-throughput manner. This technology is mostly applied for rapid analysis of glycans-protein interactions in the field of functional glycomics. In order to expand application areas of glycan microarrays, we have used carbohydrate microarrays for measurement of binding affinities between glycans and proteins and profiling of glycosyltransferase activities. The glycan microarrays used for these studies are constructed by immobilizing maleimide or hydrazide-conjugated glycans on the thiol or hydrazide-derivatized glass slides, respectively. This protocol describes the fabrication of carbohydrate microarrays and their applications to enzymatic reactions and determination of quantitative binding affinities.

Original languageEnglish
Title of host publicationCarbohydrate Microarrays
Subtitle of host publicationMethods and Protocols
EditorsYann Chevolot
Pages103-116
Number of pages14
DOIs
Publication statusPublished - 2012 Jan 1

Publication series

NameMethods in Molecular Biology
Volume808
ISSN (Print)1064-3745

Fingerprint

Polysaccharides
Carbohydrates
Proteins
Glycomics
Physiological Phenomena
Technology
Biological Phenomena
Glycosyltransferases
Pathologic Processes
Sulfhydryl Compounds
Glass

All Science Journal Classification (ASJC) codes

  • Molecular Biology
  • Genetics

Cite this

Lee, M. R., Park, S., & Shin, I. (2012). Carbohydrate microarrays for enzymatic reactions and quantification of binding affinities for glycan-protein interactions. In Y. Chevolot (Ed.), Carbohydrate Microarrays: Methods and Protocols (pp. 103-116). (Methods in Molecular Biology; Vol. 808). https://doi.org/10.1007/978-1-61779-373-8_7
Lee, Myung Ryul ; Park, Sungjin ; Shin, Injae. / Carbohydrate microarrays for enzymatic reactions and quantification of binding affinities for glycan-protein interactions. Carbohydrate Microarrays: Methods and Protocols. editor / Yann Chevolot. 2012. pp. 103-116 (Methods in Molecular Biology).
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Lee, MR, Park, S & Shin, I 2012, Carbohydrate microarrays for enzymatic reactions and quantification of binding affinities for glycan-protein interactions. in Y Chevolot (ed.), Carbohydrate Microarrays: Methods and Protocols. Methods in Molecular Biology, vol. 808, pp. 103-116. https://doi.org/10.1007/978-1-61779-373-8_7

Carbohydrate microarrays for enzymatic reactions and quantification of binding affinities for glycan-protein interactions. / Lee, Myung Ryul; Park, Sungjin; Shin, Injae.

Carbohydrate Microarrays: Methods and Protocols. ed. / Yann Chevolot. 2012. p. 103-116 (Methods in Molecular Biology; Vol. 808).

Research output: Chapter in Book/Report/Conference proceedingChapter

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Lee MR, Park S, Shin I. Carbohydrate microarrays for enzymatic reactions and quantification of binding affinities for glycan-protein interactions. In Chevolot Y, editor, Carbohydrate Microarrays: Methods and Protocols. 2012. p. 103-116. (Methods in Molecular Biology). https://doi.org/10.1007/978-1-61779-373-8_7