Cyclic Peptide-Decorated Self-Assembled Nanohybrids for Selective Recognition and Detection of Multivalent RNAs

Jun Shik Choi, So Hee Han, Hyoseok Kim, Yong-beom Lim

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

Although there has been substantial advancement in the development of nanostructures, the development of self-assembled nanostructures that can selectively recognize multivalent targets has been very difficult. Here we show the proof of concept that topology-controlled peptide nanoassemblies can selectively recognize and detect a multivalent RNA target. We compared the differential behaviors of peptides in a linear or cyclic topology in terms of peptide-gold nanoparticle hybrid nanostructure formation, conformational stabilization, monovalent and multivalent RNA binding in vitro, and multivalent RNA recognition in live cells. When the topology-dependent selectivity amplification of the cyclic peptide hybrids is combined with the noninvasive nature of dark-field microscopy, the cellular localization of the viral Rev response element (RRE) RNA can be monitored in situ. Because intracellular interactions are often mediated by overlapping binding partners with weak affinity, the topology-controlled peptide assemblies can provide a versatile means to convert weak ligands into multivalent ligands with high affinity and selectivity.

Original languageEnglish
Pages (from-to)799-808
Number of pages10
JournalBioconjugate Chemistry
Volume27
Issue number3
DOIs
Publication statusPublished - 2016 Mar 16

Fingerprint

Cyclic Peptides
RNA
Peptides
Nanostructures
Topology
Ligands
Response Elements
Gold
Nanoparticles
Amplification
Microscopy
Microscopic examination
Stabilization

All Science Journal Classification (ASJC) codes

  • Biotechnology
  • Bioengineering
  • Biomedical Engineering
  • Pharmacology
  • Pharmaceutical Science
  • Organic Chemistry

Cite this

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Cyclic Peptide-Decorated Self-Assembled Nanohybrids for Selective Recognition and Detection of Multivalent RNAs. / Choi, Jun Shik; Han, So Hee; Kim, Hyoseok; Lim, Yong-beom.

In: Bioconjugate Chemistry, Vol. 27, No. 3, 16.03.2016, p. 799-808.

Research output: Contribution to journalArticle

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