Multiple Polymorphic Loci for Molecular Typing of Strains of Mycobacterium leprae

Nathan A. Groathouse, Becky Rivoire, Hansuk Kim, Hyeyoung Lee, Sangnae Cho, Patrick J. Brennan, Varalakshmi D. Vissa

Research output: Contribution to journalArticle

71 Citations (Scopus)

Abstract

The need for molecular tools for the differentiation of isolates of Mycobacterium leprae, the organism that causes leprosy, is urgent in view of the continuing high levels of new case detection, despite years of aggressive chemotherapy and the consequent reduction in the prevalence of leprosy. The slow onset of leprosy and the reliance on physical examination for detection of disease have restricted the epidemiological tracking necessary to understand and control transmission. Two genetic loci in several isolates of M. leprae have previously been demonstrated to contain variable-number tandem repeats (VNTRs). On the basis of these reports and the availability of the full genome sequence, multiple-locus VNTR analysis for strain typing has been undertaken. A panel of 11 short tandem repeat (STR) loci with repeat units of 1, 2, 3, 6, 12, 18, 21, and 27 bp from four clinical isolates of M. leprae propagated in armadillo hosts were screened by PCR. Fragment length polymorphisms were detected at 9 of the 11 loci by agarose gel electrophoresis. Sequencing of representative DNA products confirmed the presence of VNTRs between isolates. The application of nine new polymorphic STRs in conjunction with automated methods for electrophoresis and size determination allows greater discrimination between isolates of M. leprae and enhances the potential of this technique to track the transmission of leprosy.

Original languageEnglish
Pages (from-to)1666-1672
Number of pages7
JournalJournal of Clinical Microbiology
Volume42
Issue number4
DOIs
Publication statusPublished - 2004 Apr 1

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Molecular Typing
Mycobacterium leprae
Leprosy
Minisatellite Repeats
Armadillos
Genetic Loci
Agar Gel Electrophoresis
DNA Sequence Analysis
Microsatellite Repeats
Physical Examination
Electrophoresis
Genome
Drug Therapy
Polymerase Chain Reaction

All Science Journal Classification (ASJC) codes

  • Microbiology (medical)
  • Microbiology

Cite this

Groathouse, Nathan A. ; Rivoire, Becky ; Kim, Hansuk ; Lee, Hyeyoung ; Cho, Sangnae ; Brennan, Patrick J. ; Vissa, Varalakshmi D. / Multiple Polymorphic Loci for Molecular Typing of Strains of Mycobacterium leprae. In: Journal of Clinical Microbiology. 2004 ; Vol. 42, No. 4. pp. 1666-1672.
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Multiple Polymorphic Loci for Molecular Typing of Strains of Mycobacterium leprae. / Groathouse, Nathan A.; Rivoire, Becky; Kim, Hansuk; Lee, Hyeyoung; Cho, Sangnae; Brennan, Patrick J.; Vissa, Varalakshmi D.

In: Journal of Clinical Microbiology, Vol. 42, No. 4, 01.04.2004, p. 1666-1672.

Research output: Contribution to journalArticle

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