Purification and spectroscopic characterization of the human protein tyrosine kinase-6 SH3 domain.

Bon Kyung Koo, Min Hyung Kim, Seung-Taek Lee, Weon Tae Lee

Research output: Contribution to journalArticle

5 Citations (Scopus)

Abstract

The human protein tyrosine kinase-6 (PTK6) polypeptide that is deduced from the cDNA sequence contains a Src homology (SH) 3 domain, SH2 domain, and catalytic domain of tyrosine kinase. We initiated biochemical and NMR characterization of PTK6 SH3 domain in order to correlate the structural role of the PTK6 using circular dichroism and heteronuclear NMR techniques. The circular dichroism data suggested that the secondary structural elements of the SH3 domain are mainly composed of beta-sheet conformations. It is most stable when the pH is neutral based on the pH titration data. In addition, a number of cross peaks at the low-field area of the proton chemical shift of the NMR spectra indicated that the PTK6 SH3 domain retains a unique and folded conformation at the neutral pH condition. For other pH conditions, the SH3 domain became unstable and aggregated during NMR measurements, indicating that the structural stability is very sensitive to pH environments. Both the NMR and circular dichroism data indicate that the PTK6 SH3 domain experiences a conformational instability, even in an aqueous solution.

Original languageEnglish
Pages (from-to)343-347
Number of pages5
JournalJournal of Biochemistry and Molecular Biology
Volume35
Issue number3
Publication statusPublished - 2002 Jan 1

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src Homology Domains
Protein-Tyrosine Kinases
Purification
Nuclear magnetic resonance
Circular Dichroism
Conformations
Biomolecular Nuclear Magnetic Resonance
Chemical shift
Titration
Protons
Complementary DNA
Catalytic Domain
Peptides

All Science Journal Classification (ASJC) codes

  • Biochemistry
  • Molecular Biology

Cite this

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Purification and spectroscopic characterization of the human protein tyrosine kinase-6 SH3 domain. / Koo, Bon Kyung; Kim, Min Hyung; Lee, Seung-Taek; Lee, Weon Tae.

In: Journal of Biochemistry and Molecular Biology, Vol. 35, No. 3, 01.01.2002, p. 343-347.

Research output: Contribution to journalArticle

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