Stochastic and regulatory role of chromatin silencing in genomic response to environmental changes

Jung Kyoon Choi, Sohyun Hwang, Young-Joon Kim

Research output: Contribution to journalArticle

8 Citations (Scopus)

Abstract

Phenotypic diversity and fidelity can be balanced by controlling stochastic molecular mechanisms. Epigenetic silencing is one that has a critical role in stress response. Here we show that in yeast, incomplete silencing increases stochastic noise in gene expression, probably owing to unstable chromatin structure. Telomere position effect is suggested as one mechanism. Expression diversity in a population achieved in this way may render a subset of cells to readily respond to various acute stresses. By contrast, strong silencing tends to suppress noisy expression of genes, in particular those involved in life cycle control. In this regime, chromatin may act as a noise filter for precisely regulated responses to environmental signals that induce huge phenotypic changes such as a cell fate transition. These results propose modulation of chromatin stability as an important determinant of environmental adaptation and cellular differentiation.

Original languageEnglish
Article numbere3002
JournalPloS one
Volume3
Issue number8
DOIs
Publication statusPublished - 2008 Aug 20

Fingerprint

Chromatin
chromatin
genomics
Noise
position effect (genetics)
Gene Expression
gene expression
telomeres
Telomere
Life Cycle Stages
Epigenomics
Gene expression
epigenetics
Yeast
Life cycle
life cycle (organisms)
stress response
Genes
Yeasts
Modulation

All Science Journal Classification (ASJC) codes

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)

Cite this

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Stochastic and regulatory role of chromatin silencing in genomic response to environmental changes. / Choi, Jung Kyoon; Hwang, Sohyun; Kim, Young-Joon.

In: PloS one, Vol. 3, No. 8, e3002, 20.08.2008.

Research output: Contribution to journalArticle

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